Browsing by Author "Shaw, Ross W."
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Item Abundance of the parasitic copepod Caligus elongatus on wild pollock near commercial salmonid net-pens(1996) Shaw, Ross W.; Opitz, M.Between July and December 1993, wild pollock Pollachius virens collected near salmonid net‐pens on the Atlantic coast of Maine in the United States were examined for parasitic copepods of the family Caligidae to determine the role of pollock as host reservoirs. Only Caligus elongatus was detected on 1,456 pollock sampled. Most pollock (97.39%) had two or fewer sea lice per fish. A maximum prevalence (percent of fish infested) of 50%, an abundance (average number per fish) of 0.9, and an intensity (average number per infested fish) of L79 were recorded. Only one larval C. elongatus was found. No seasonal or geographic trends in infestation statistics were observed.Item Analysis of organic and heavy metal pollutants in marine planktonic organisms from Bamfield, British Columbia by ICP-OES and GC-(2020) Schaub, Addison; Shaw, Ross W.; Mugo, SamuelPlankton form the base of the marine ecosystem (Levinton, J.S., 2017). It is for this reason it is important to understand the interactions between these critical organisms and the pollutants that they encounter. Heavy metals occur naturally in trace amounts and are continuously being released into the atmosphere, hydrosphere, lithosphere, and biosphere of the Earth (Atici et al., 2010; Burada et al., 2014; Callow, P., 1993). The increase in sea water temperatures is increasing the solubility of heavy metals in the water (Levinton, J.S., 2017). Organic pollutants such as pesticides are hydrophobic and lipophilic (Chiuchiolo et al., 2004). Previous results obtained by Kathryn Farmer in 2015 found that an increase in some heavy metals and not others in the four year difference in the Bamfield samples. Analysis of organic pollutants by GC-MS was unable to determine if peaks were the result of pesticides or not and was not able to identify any specific pesticides through the NIST library (Farmer, 2015). This analysis found the majority of the plankton samples showed significant difference between one another for all detected heavy metals. Analysis of organic pollutants was suspended sue to Covid-19 response.Item Assessing the spread and establishment of Prussian carp (Carassius gibelio) in northern Alberta(2021) Jessen, Erika; Shaw, Ross W.; Das, MrinalThe Prussian carp (Cassasius gibelio) is an exceptionally dangerous invasive freshwater fish species. Native to Asia and eastern Europe, it has come to dominate many freshwater bodies across Eurasia through anthropogenic activities, causing extensive ecological damage by outcompeting native taxa and degrading environmental conditions. Within the last two decades, the Prussian carp has been introduced into Alberta, and has since spread into the rivers and lakes of the province. To date, most research relating to Prussian carp in North America has focused exclusively on southern Alberta. My research project aimed to expand research into northern Alberta, specifically the Edmonton region, with the objective to determine if Prussian Carp have spread into northern Alberta. Twelve lakes and ponds in the Edmonton area were surveyed using an underwater drone to collect footage. Four of these sites were further subjected to eDNA analysis. The results of the drone footage picked up a mixture of native and invasive fish species, with two being positive for goldfish. The eDNA analysis picked up neither goldfish or Prussian carp DNA at any of the test sites, likely due to low eDNA concentrations. Overall, these results highlight the need for ecological management to mitigate the spread of invasive fish species in Alberta.Item Creative, interdisciplinary undergraduate research: an educational cell biology video game designed by students for students(2020) Sperano, Isabelle; Shaw, Ross W.; Andruchow, Robert; Cobzas, Dana; Efird, Cory; Brookwell, Brian; Deng, WilliamIn a three-year, practice-based, creative research project, the team designed a video game for undergraduate biology students that aimed to find the right balance between educational content and entertainment. The project involved 7 faculty members and 14 undergraduate students from biological science, design, computer science, and music. This nontraditional approach to research was attractive to students. Working on an interdisciplinary practice-based research project required strategies related to timeline, recruitment, funding, team management, and mentoring. Although this project was time-consuming and full of challenges, it created meaningful learning experiences not only for students but also for faculty members.Item Determining recovery success in Anthelia sp. after exposure to varying levels of thermal stress(2020) Hender, Rebecca; Shaw, Ross W.Coral bleaching is a phenomenon caused by anthropogenically increased ocean temperatures, and may lead to the eventual death of massive reef systems. Bleaching is the result of corals expelling dinoflagellate endosymbionts in order to compensate for thermal stress. However, the loss of symbionts leads to a subsequent reduction in fluorescence intensity emitted by the coral. Substantial research has been done on coral bleaching due to environmental stressors, but little knowledge has been acquired about coral recovery after thermal stress. The present study aimed to determine how Anthelia species recover after being exposed to varying levels of temperature stress. Corals were exposed to varying levels of heat stress and subsequently brought back down in temperature to promote recovery. Using fluorescence microscopy, a relatively new method of quantifying coral health, and health-colour indices, recovery ability after thermal stress was determined. Analyses concluded that corals were able to successfully recover after thermal stress of 31°C, and exhibit a thermal compensation point around 30°C. However, beyond 31°C, recovery was not achievable. The findings of this study are beneficial to the larger coral research field because they indicate that corals do possess recovery ability up until reaching a fatal thermal maximum.Item Ecomorph or endangered coral? DNA and microstructure reveal Hawaiian species complexes: montipora dilatata/ flabellata/turgescens & M. patula/verrilli(2010) Forsman, Z. H.; Concepcion, G. T.; Haverkort, R. D.; Shaw, Ross W.; Maragos, J. E.; Toonen, R. J.M. dilatata, M. flabellata, and M. patula and 80 other scleractinian corals were petitioned to be listed under the US Endangered Species Act (ESA), which would have major conservation implications. One of the difficulties with this evaluation is that reproductive boundaries between morphologically defined coral species are often permeable, and morphology can be wildly variable. We examined genetic and morphological variation in Hawaiian Montipora with a suite of molecular markers (mitochondrial: COI, CR, Cyt-B, 16S, ATP6; nuclear: ATPsβ, ITS) and microscopic skeletal measurements. Mitochondrial markers and the ITS region revealed four distinct clades: I) M. patula/M. verrilli, II) M. cf. incrassata, III) M. capitata, IV) M. dilatata/M. flabellata/M. cf. turgescens. These clades are likely to occur outside of Hawai'i according to mitochondrial control region haplotypes from previous studies. The ATPsβ intron data showed a pattern often interpreted as resulting from hybridization and introgression; however, incomplete lineage sorting may be more likely since the multicopy nuclear ITS region was consistent with the mitochondrial data. Furthermore, principal components analysis (PCA) of skeletal microstructure was concordant with the mitochondrial clades, while nominal taxa overlapped. The size and shape of verrucae or papillae contributed most to identifying groups, while colony-level morphology was highly variable. It is not yet clear if these species complexes represent population-level variation or incipient speciation (CA<1MYA), two alternatives that have very different conservation implications. This study highlights the difficulty in understanding the scale of genetic and morphological variation that corresponds to species as opposed to population-level variation, information that is essential for conservation and for understanding coral biodiversity.Item Effect of thermal stress on fluorescence and dinoflagellate density in the captive coral, Anthelia spp.(2018) Santos, Joleen; Shaw, Ross W.The obligate mutualistic relationship between corals and dinoflagellates is a classic example of symbiosis. Over the last few decades, coral reefs have been devastated by warm temperatures, hence, the necessity to develop a method to predict future mass bleaching events is higher than ever. Fluorescence might be used as an indicator of coral health, but very few studies have attempted to utilize it as a proxy for dinoflagellate density, which was the scope of the present research. The goal of this study was to determine the effects of thermal stress on fluorescence and dinoflagellate density in the captive coral, Anthelia spp.. Over a five-week period, tanks filled with Anthelia spp. underwent gradual increases in temperature, beginning at 28°C and ending at 33°C. Samples were quantified for fluorescence and dinoflagellate density using fluorescence microscopy and a maceration method. As the temperature gradually increased, fluorescence values subsequently decreased. In contrast, dinoflagellate density first increased until it reached a threshold, followed by a sudden drop in numbers. Symbionts might be increasing their mitotic rate in response to thermal stress to compensate for the shortage of photosynthate supply for their host. Therefore, fluorescence analysis may be a potential predictor of coral bleaching in Anthelia spp.Item Effects of thermal stress on fluorescence and dinoflagellate density in the captive coral, Anthelia spp.(2018) Santos, Joleen; Shaw, Ross W.The obligate mutualistic relationship between corals and dinoflagellates is a classic example of symbiosis. Over the last few decades, coral reefs have been devastated by warm temperatures, hence, the necessity to develop a method to predict future mass bleaching events is higher than ever. Fluorescence might be used as an indicator of coral health, but very few studies have attempted to utilize it as a proxy for dinoflagellate density, which was the scope of the present research. The goal of this study was to determine the effects of thermal stress on fluorescence and dinoflagellate density in the captive coral, Anthelia spp. Over a five-week period, tanks filled with Anthelia spp. underwent gradual increases in temperature, beginning at 28°C and ending at 33°C. Samples were quantified for fluorescence and dinoflagellate density using fluorescence microscopy and a maceration method. As temperature gradually increased, fluorescence values subsequently decreased. In contrast, dinoflagellate density first increased until it reached a threshold, followed by a sudden drop in numbers. Symbionts might be increasing their mitotic rate in response to thermal stress to compensate for the shortage of photosynthate supply for their host. Therefore, fluorescence analysis may be a potential predictor of coral bleaching in Anthelia spp.Item Experimental and natural host specificity of Loma salmonae (Microsporidia)(2000) Shaw, Ross W.; Kent, Michael L.; Brown, A. M.; Whipps, C. M.; Adamson, Martin L.The microsporidian Loma salmonae (Putz, Hoffman & Dunbar, 1965) Morrison & Sprague, 1981 has caused significant gill disease in Pacific salmon Oncorhynchus spp. Host specificity of the parasite was examined experimentally by per os challenge of selected salmonids and non-salmonids with infective chinook salmon O. tshawytscha gill material. Pink Oncorhynchus gorbuscha and chum salmon O. keta, brown Salmo trutta and brook trout Salvelinus fontinalis, and chinook salmon (controls) were positive, whereas Atlantic salmon Salmo salar and Arctic char Salvelinus alpinus were negative. In addition, no non-salmonids were susceptible to experimental exposure. Wild Pacific salmon species in British Columbia, Canada, were examined for L. salmonae during their freshwater life history stages (smolts, prespawning, spawning). All stages were infected, although infections in smolts were only detectable using a L. salmonae-specific PCR test. Many previous Loma spp. described from Oncorhychus spp. are likely L. salmonae based on host, parasite morphology, and site of infection.Item Host tracking and photosensitivity in Chaetogaster limnaei limnaei (Oligochaeta)(1992) Shaw, Ross W.Chaetogaster limnaei limnaei were separated from host snails (Physa skinneri) for increasing periods of time. The oligochaetes responded to a snail's slime trail by increased activity and distance moved along the slime trail. These responses increased with increasing periods of separation from the snail. When exposed to a directional light source, C. l. limnaei displayed an initial positive phototactic response. Movement towards light from the same direction decreased significantly in a second 4-h period, but movement towards light from a different direction was equivalent to the initial response, suggesting the response was an initial one to a change in light.Item Identifying unknown soft coral species of Anthelia (Octocorallia) with multilocus DNA barcoding(2023) Pataria, Mannraj; Shaw, Ross W.; Miller, Joshua M.There are an estimated 1-9 million species of corals yet to be discovered. Anthelia is a species of soft coral that belongs to the Xeniid ae family within Octocorallia. The Xeniidae family of soft corals are of interest due to their ability to rapidly recolonize disturbed reefs, which have become more prevalent with global warming. Octocorallia also contains some of the most valuable corals used in jewelry. Identifying corals not only contributes to its conservation and our knowledge of its evolution, but also prevents fraudulent coral jewelry and the overharvesting of coral beds. However, morphologically identifying corals is very difficult and is further exacerbated with global warming or when it is polished and carved into jewelry. Instead, multilocus DNA barcoding can utilize the genetic material of corals to reveal an accurate classification of species and prevent its exploitation. Specifically, genetic loci in the mitochondrial or nuclear genes can be used to tag and classify corals, with referencing done to genetic databases such as GenBank or NCBI. We identified the soft corals Anthelia glauca, Sarcophtyon tro cheliophorum, and a Sinularia spp. that was mistaken for a species of Nepthea.Item Infection of Aulorhynchus flavidus (Gill) (Osteichthyes: Gasterosteiformes) by Kudoa thyrsites (Gilchrist) (Myxosporea: Multivalvulida)(1997) Shaw, Ross W.; Hervio, Dominique M. L. ; Devlin, Robert H.; Adamson, Martin L.The myxosporean parasite Kudoa thyrsites is reported from a new host, Aulorhynchus flavidus, the tube-snout, collected near Vancouver, British Columbia, Canada. Prevalence reached 100% and intensity 1,535 pseudocysts per 2 cm length of fish. Polymerase chain reaction primers specific for K. thyrsites amplified a fragment of the small subunit rDNA and confirmed identification. These primers also allowed detection of K. thyrsites in young (<4-mo-old) fish with no other apparent sign of infection. No inflammatory response or liquefaction of host tissue was associated with the infection. The number of pseudocysts per infected fish was not correlated with fish size or condition, although larger fish (total length) had larger pseudocysts (rs = 0.437, P < 0.001). This finding brings to 28 the number of potential hosts for the species. Kudoa thyrsites is a well recognized cause of soft flesh in netpen-reared Atlantic salmon in coastal waters of British Columbia. Tube-snouts are common in and around these netpens, and thus may be a significant host reservoir for K. thyrsites.Item Innate susceptibility differences in Chinook salmon Oncorhynchus tshawytscha to Loma salmonae (Microsporidia)(2000) Shaw, Ross W.; Kent, Michael L.; Adamson, Martin L.Loma salmonae (Putz, Hoffman and Dunbar, 1965) Morrison & Sprague, 1981 (Microsporidia) is an important gill pathogen of Pacific salmon Oncorhynchus spp. in the Pacific Northwest. Three strains of chinook salmon O. tshawytscha were infected in 2 trials with L. salmonae by feeding of macerated infected gill tissue or per os as a gill tissue slurry. Intensity of infection was significantly higher in the Northern stream (NS) strain as compared to the Southern coastal (SC) and a hybrid (H) strain derived from these 2 strains. Both wet mount and histological enumeration of intensity of infection demonstrated strain differences. Survival in the NS strain was significantly lower than the other strains. The NS strain may represent a naive strain and be less able to mount an effective immune response against the parasite.Item Interaction design and educational video games: motivating undergraduate students to explore new territories(2019) Sperano, Isabelle; Andruchow, Robert; Shaw, Ross W.Can interaction design students design a game that is educational and fun to play? In which areas could undergraduate interaction design students be involved when designing an educational video game? What unique learning experiences could be acquired by designing an educational video game? What are some challenges for the integration of educational game design in design education? To answer these questions, we partnered with a Biological Sciences professor interested in developing a video game for undergraduate biology students. We thought this could be both an interesting interaction design problem to tackle and an engaging pedagogical experiment. To do so, we hired undergraduate interaction design and computing science students to work with us on the concept and then on the development of a video game prototype.Item Iodophor treatment is not completely efficacious in preventing Loma salmonae (Microsporidia) transmission in experimentally challenged Chinook salmon, Oncorhynchus tshawytscha (Walbaum)(1999) Shaw, Ross W.; Kent, Michael L.; Adamson, Martin L.Loma salmonae is a microsporidian parasite pre-dominately infecting the endothelial cells of Pacificsalmon, Oncorhynchus spp. Loma salmonae formshypertrophied cells (xenomas) which are oftenvisible as white cysts in the gills. The parasite hasbeen associated with significant mortalities inspawning wild stocks (M. Higgins, personal com-munication), hatcheries (Hauck 1984) and inmarine netpen farms in the Pacific North-west(Kent, Elliott, Groff & Hedrick 1989; Speare,Brackett & Ferguson 1989; Shaw & Kent 1999).Item Is Montipora dilatata an endangered coral species or an ecotype? Genes and skeletal microstructure lump seven Hawaiian species into four groups(2010) Forsman, Z. H.; Concepcion, G. T.; Haverkort, R. D.; Shaw, Ross W.; Maragos, J. E.; Toonen, R. J.Montipora dilatata is considered to be one of the rarest corals known. Thought to be endemic to Hawaii, only a few colonies have ever been found despite extensive surveys. Endangered species status would have major conservation implications; however, coral species boundaries are poorly understood. In order to examine genetic and morphological variation in Hawaiian Montipora, a suite of molecular markers (mitochondrial: COI, CR, Cyt-B, 16S, ATP6; nuclear: ATPsβ, ITS), in addition to a suite of measurements on skeletal microstructure, were examined. The ITS region and mitochondrial markers revealed four distinct clades: I) M. patula/M. verilli, II) M. incrassata, III) M. capitata, IV) M. dilatata/M. flabellata/M. turgescens. The nuclear ATPsβ intron tree had several exceptions that are generally interpreted as resulting from recent hybridization between clades or incomplete lineage sorting. Since the multicopy nuclear ITS region was concordant with the mitochondrial data, incomplete lineage sorting of the ATPsβ intron is a more likely explanation. Principal components analysis (PCA) of microstructure measurements agreed with the genetic clades rather than the nominal taxa. These species groups therefore either represent recent or insipient (CA <1MYA) species or morphological variants of the same biological species. These clades are likely to occur outside of Hawaii according to mitochondrial control region haplotypes from previous studies. Common garden experiments were conducted on distinct morphotypes of M. capitata to test the hypothesis that micro-skeletal traits can be phenotypically plastic in this genus. Although the experiment suffered high mortality from parasitic flatworms, verrucae (rice-grain sized bumps) were documented to form on formerly smooth colonies, indicating plasticity. This study contributes towards understanding the relationship between genetic and morphological variation in this taxonomically challenging group, which is essential for effective conservation and the key to understanding the evolution and biodiversity of reef building corals.Item Life on the edge: supporting students’ learning of cell biology(2023) Sperano, Isabelle; Byrne, Liam; Bong, Ji Yae; Shaw, Ross W.; Andruchow, RobertThe video game "Life on the Edge" is an educational game that aims to instruct and engage undergraduate biology students on the intricacies of cell biology. Developed by a collaborative team comprising researchers and students from biology, design, computer science, educational technology, and music at MacEwan and Concordia University, the game aims to provide an interactive and visually stimulating environment to help undergraduate biology students learn and understand cell biology concepts effectively. The development process is also complemented by research to evaluate the game’s effectiveness in enhancing students' game-based learning experiences. In this session, participants will be afforded the opportunity to engage with the game and provide feedback to the game's creators on new game features currently under development.Item Microsporidia in fish(2014) Kent, Michael L.; Shaw, Ross W.; Sanders, Justin L.; Weiss, Louis M.; Becnel, James J.The importance of microsporidia in captive fishes continues to increase with the continued dramatic increase in finfish aquaculture. Most microsporidia of fish are transmitted without intermediate hosts, and hence, cultured fish are particularly susceptible to microsporidian infections due to high stocking densities, compared to their wild counterparts. There are several examples of microsporidia causing disease in cultured food fishes. Early investigations of fish microsporidia included some observations of host response. Several drugs have been used to treat microsporidian infections in fish, mostly on an experimental basis. Most reports of successful treatments were with fumagillin. This drug is an antimicrobial agent developed for treating Nosema apis infections in honeybees and is the most widely used drug used for treating microsporidiosis in fishes.Item Modes of transmission of Loma salmonae (Microsporidia)(1998) Shaw, Ross W.; Kent, Michael L.; Adamson, Martin L.Loma salmonae (Putz, Hoffman and Dunbar, 1965) Morrison and Sprague, 1981 (Microsporidia) causes prominent gill disease in pen-reared chinook salmon Oncorhynchus tshawytscha in the Pacific Northwest. Transmission of the parasite was examined by exposing Pacific salmon Oncorhynchus spp. to infectious spores by various routes: per os, intraperitoneal, intramuscular, and intravascular injection, by cohabitation with infected fish, and by placement of spores directly on the gill. All exposure methods led to infections except placement of spores on the gill. Putative sporoplasms were visible in epithelial cells of the alimentary canal within 24 h of per os exposure. L. salmonae may initially infect alimentary epithelial cells and then migrate into the lamina propia to access the blood stream. Positive results obtained by intravascular injection suggest that autoinfection from spores of ruptured xenomas in the endothelium may also occur. The cohabitation experiment demonstrates that fish may become infected by spores released from live fish.Item A new species of Loma (Microsporea) in Shiner perch (Cymatogaster aggregata)(1997) Shaw, Ross W.; Kent, Michael L.; Docker, Margaret F.; Brown, A. M.; Devlin, Robert H.; Adamson, Martin L.Loma embiotocia n. sp. is described from the gills of shiner perch (Cymatogaster aggregata) from waters off Vancouver Island, British Columbia, Canada. Highest prevalence at a site was 15% and greatest intensity was 583 xenomas per fish. Xenomas averaged 0.13 mm in diameter (0.06-0.16 mm) and contained ovoid spores 4.8 x 2.6 (4.0-5.0 x 2.0-3.0) µm. Sporogonic stages were dispersed throughout the xenomas. The xenoma wall was smooth lacking invaginations into the cytoplasm; sporoblasts were not highly vacuolated, and the sporophorous vesicle formed before sporogony. In addition to differences in host and geographic location the new species is distinguished from Loma salmonae, the only other species in the genus known from British Columbia, by its internal transcribed spacer (ITS) ribosomal DNA sequence.